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This repository moved to https://forgemia.inra.fr/umr-astre/amr-laos

Early prototype and test bed for some of the functionality built in the actual project https://gitlab.cirad.fr/astre/riskintro

Herds Activity Mapping and Analytical Classification routine

R package for simulating age-structured population matrix models

R package for calculating demographic parameters of livestock populations from 12MO survey data

R package using a discrete-time approach for estimating demographic parameters from animal-based monitoring Laser data

Modèles mathématiques appliquées à l'épidémiologie https://astre.gitlab.cirad.fr/training/modelisation-dynamique-epidemiologie

Estimation and Simulation of Animal Production

A snakemake workflow for functional annotation

A snakemake workflow for phylogenetic analysis of protein families